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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921758.1_cds_XP_016470667.1_63091
CDS Infomation

[gene=LOC107792920] [db_xref=GeneID:107792920] [protein=root phototropism protein 3-like] [protein_id=XP_016470667.1] [location=complement(join(15188..15745,16811..17328,17560..17776))] [gbkey=CDS]
Sequence

ATGAAGAAGCTAACATTGCCGGAACCCATAAATTTTCCGGGCAAATCTACTCATTTCTCG
GCCGAATGTTGGTTCGACGACACGTGTATCCTCGACATGGACTACTTTGTCAAAACACTT
TCCGGCATTAAAGCCAAAGGTGTTCGTCCTGAACTTATTGGCTCAATTATTACTCATTAT
GCTTCTAAATGGCTTCCTGACCTTTCTACTGGAGAAGGTTCAGAAGTGTTAAGCCCAAAA
AATTTCGAAGACTCACCGGAAAGTGTCACGGCGTTATGGATGAAAAAGAGGTTCTTTGTA
GAAACTTTGGTCGGAATTCTGCCGCCGGAGAAAGATTCAATCCCTTGCAATTTCCTCTTA
CGTTTGCTACGAATCGCAAATATGGTTTCAGTCGAGCCCAGTTACAGAGCCGAGCTGGAG
AAAAGGATATCGTGGCAACTGGACCAGGCTACTTTGAAAGAGCTAATGATTCCGTCTTTT
AGTCACACGTGTGGGACATTGCTAGATGTTGAGCTTGTTCTTAGGTTGGTTAAGAGGTTC
GTGAATTTTGATGAAGCCGTAAGAAGTGGAACAGCTTTAATTAAGGTAGCGAAACTTGTG
GATAATTACTTAGCTGAAGCTGCTGTTGATGCAAACTTGACATTGTCGGAGTTCATTGCT
CTTGCTGGTGCATTTCCTGAACATGCTCGGGCTACAGATGATGGCTTGTACAGAGCTATT
GACACATATCTCAAAGCGCATCCCGGGGTGACAAAACAAGAAAGAAAAAGTCTATGCAGA
TTGATAGATAGCAGAAAGCTATCGCCAGAGGCATCCCTACATGCAGCACAAAACGAACGT
TTACCCGTGCGAGCAGTAATTCAAGTATTATTATCCGAACAAACCAAGCTCAACAATAAC
AAGCAGCAAATTGATTGGAGTGGTTCCTTTATAAGTGGCACCAGAAGCCCCAACGCGGGG
ATAAATGATCAGCCTCCAGCTCGGTGTATGTCAAAGCGCGAAATGAACGTTCAGCAGATG
GAGATAAAGAGGCTGAAAGAAGATGTTCTTAGACTACAGAGTCAGTGTATGACAATGCAA
GCACAGATTGAGAAGTTGCTGGAAAAGAAAAGAGGCAGCAGCTTCTTTAGTTGGAAGAAG
ATTATTGTACCTTCTTTAGTTAAGCATGATAAAATTGGAGAGGTTGATAGAGAAACTGAT
GTGGGATTTATTGGAAGACAAACTCCTGTGGATATGAAGACCAGGCTTGTTCGAGGCAGA
ACACCTAACAAGTGGAGGAAATCTTTGTCCTGA

Peptide Sequence

PEP ID

XP_016470667.1
PEP Infomation

PREDICTED: root phototropism protein 3-like [Nicotiana tabacum]
Sequence

MKKLTLPEPINFPGKSTHFSAECWFDDTCILDMDYFVKTLSGIKAKGVRPELIGSIITHY
ASKWLPDLSTGEGSEVLSPKNFEDSPESVTALWMKKRFFVETLVGILPPEKDSIPCNFLL
RLLRIANMVSVEPSYRAELEKRISWQLDQATLKELMIPSFSHTCGTLLDVELVLRLVKRF
VNFDEAVRSGTALIKVAKLVDNYLAEAAVDANLTLSEFIALAGAFPEHARATDDGLYRAI
DTYLKAHPGVTKQERKSLCRLIDSRKLSPEASLHAAQNERLPVRAVIQVLLSEQTKLNNN
KQQIDWSGSFISGTRSPNAGINDQPPARCMSKREMNVQQMEIKRLKEDVLRLQSQCMTMQ
AQIEKLLEKKRGSSFFSWKKIIVPSLVKHDKIGEVDRETDVGFIGRQTPVDMKTRLVRGR
TPNKWRKSLS

Transcript Sequence

Gene sequence data has not been registered.